LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-15a-5p


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
76878-76897
0.019
1
8mer
17088-17115
0.017
1
9mer
126679-126697
0.013
5
9mer
42344-42365
0.010
1
7mer
191162-191177
0.009
9
7mer
139337-139362
0.008
2
7mer
12763-12775
0.008
1
7mer
55562-55587
0.007
2
7mer
119556-119575
0.007
8
8mer
165235-165260
0.007
0
7mer
120301-120321
0.007
12
8mer
265418-265444
0.006
1
7mer
35339-35360
0.006
2
8mer
259729-259745
0.006
Not Conserved
7mer
261014-261033
0.006
0
7mer
33565-33589
0.006
Not Conserved
7mer
100241-100265
0.005
7
7mer
100164-100187
0.005
3
7mer
258618-258638
0.005
1
7mer
120348-120373
0.005
11
7mer
171512-171527
0.004
1
7mer
20141-20165
0.004
1
7mer
83635-83657
0.004
2
7mer
75539-75559
0.004
3
7mer
66577-66593
0.004
1
7mer
99417-99435
0.004
2
7mer
62811-62834
0.004
Not Conserved
8mer
150608-150630
0.003
2
7mer
52969-52992
0.003
2
7mer
204563-204578
0.003
0
7mer
124121-124141
0.003
1
7mer
72098-72117
0.003
1
7mer
259253-259271
0.003
0
7mer
6786-6807
0.003
1
6mer
117626-117638
0.003
2
7mer
2362-2372
0.003
0
7mer
150608-150627
0.003
1
7mer
103913-103938
0.003
0
8mer
195031-195046
0.003
1
7mer
7444-7463
0.002
1
7mer
264862-264879
0.002
0
6mer
92018-92022
0.002
1
7mer
123068-123084
0.002
Not Conserved
6mer
119705-119730
0.002
9
7mer
125472-125495
0.002
3
6mer
74852-74864
0.002
5
7mer
179946-179966
0.002
0
7mer
120094-120121
0.002
7
7mer
231405-231429
0.002
0
8mer+wobble
20375-20397
0.002
1
7mer
109888-109902
0.002
0
7mer
118887-118907
0.002
1
6mer
118233-118250
0.002
8
7mer
261045-261060
0.002
0
6mer
39531-39550
0.002
4
6mer
215553-215569
0.002
2
8mer
256021-256039
0.002
0
6mer
34521-34536
0.002
1
6mer
115859-115882
0.002
1
6mer
191484-191507
0.002
1
6mer
58427-58438
0.002
5
6mer
188218-188235
0.002
1
6mer
211487-211506
0.002
0
6mer
198842-198861
0.002
1
7mer
190468-190494
0.002
0
8mer
7444-7466
0.002
1
6mer
25958-25971
0.002
3
6mer
128579-128605
0.002
3
6mer
12933-12948
0.002
7
6mer
128854-128875
0.002
3
6mer
266160-266186
0.002
1
6mer
249221-249234
0.002
0
6mer
181615-181635
0.002
3
6mer
105161-105183
0.002
1
7mer
223280-223303
0.002
0
6mer
53765-53791
0.001
4
6mer
197049-197065
0.001
0
6mer
197223-197245
0.001
2
6mer
130232-130257
0.001
3
6mer
29097-29113
0.001
4
6mer
222180-222202
0.001
0
6mer
68150-68175
0.001
0
6mer
240811-240829
0.001
1
6mer
13064-13089
0.001
8
6mer
200936-200954
0.001
0
6mer
23946-23972
0.001
Not Conserved
6mer
3287-3311
0.001
1
6mer
192136-192155
0.001
1
6mer
213756-213782
0.001
2
6mer
156101-156120
0.001
1
6mer
161088-161100
0.001
0
6mer
178512-178527
0.001
4
6mer
32062-32079
0.001
1
6mer
48157-48178
0.001
2
6mer
207860-207885
0.001
0
6mer
76369-76388
0.001
1
6mer
263178-263200
0.001
Not Conserved
6mer
42487-42506
0.001
1
6mer
86548-86562
0.001
1
6mer
105577-105595
0.001
0
6mer
143948-143972
0.001
1
6mer
4872-4889
0.001
0
6mer
84244-84265
0.001
1
6mer
54780-54802
0.001
4
6mer
226528-226554
0.001
2
6mer
210875-210897
0.001
0
6mer
21914-21937
0.001
1
6mer
40104-40124
0.001
2
6mer
83025-83050
0.001
1
6mer
103304-103317
0.001
1
6mer
107686-107702
0.001
2
6mer
132932-132957
0.001
0
6mer
183318-183333
0.001
1
6mer
113252-113275
0.001
1
6mer
73570-73595
0.001
0
6mer
124545-124561
0.001
1
6mer
93306-93328
0.001
1
6mer
246517-246542
0.001
0
6mer
104645-104667
0.001
1
6mer
213414-213432
0.001
0
6mer
214241-214258
0.001
1
6mer
146286-146301
0.001
Not Conserved
6mer
209919-209934
0.001
1
6mer
61707-61724
0.001
0
6mer
122010-122022
0.001
0
6mer
116273-116293
0.001
1
6mer
49249-49271
0.001
1
7mer
2362-2374
0.001
0
6mer
222725-222741
0.001
0
6mer
199356-199374
0.001
0
6mer
199680-199701
0.001
1
6mer
95135-95161
0.001
0
6mer
234839-234863
0.001
0
7mer
72098-72120
0.001
1
6mer
140151-140174
0.001
1
6mer
260011-260030
0.001
2
7mer
185855-185873
0.001
1
6mer
185849-185868
0.001
0
6mer
149320-149338
0.001
Not Conserved
6mer
74961-74975
0.001
2
7mer
120411-120436
0.001
3
6mer
236042-236066
0.001
0
6mer
125368-125386
0.001
1
6mer
242259-242282
0.001
Not Conserved
7mer
185855-185871
0.001
1
7mer
12934-12951
0.001
2
7mer
103919-103940
0.001
1
7mer
124545-124563
0.001
3
6mer
256044-256067
0.000
1
6mer
185886-185890
0.000
Not Conserved
6mer
178513-178538
0.000
Not Conserved
CTBP1-AS2
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505364
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
273-290
0.229
1
6mer
2059-2083
0.013
1
XLOC_013778
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028426
Biotype: transcript isomorph
Gene id: XLOC_013778
Gene Name: XLOC_013778
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
124-144
0.021
0
8mer
227-242
0.015
0
8mer
539-554
0.011
0
8mer
753-778
0.009
0
8mer
282-307
0.008
Not Conserved
8mer
3559-3577
0.007
0
8mer
647-667
0.006
0
8mer
3243-3260
0.006
0
9mer
2622-2643
0.006
Not Conserved
8mer
964-989
0.006
1
8mer
1070-1085
0.005
1
8mer
3975-3990
0.005
0
8mer
4638-4653
0.005
0
8mer
2890-2906
0.005
Not Conserved
8mer
1268-1293
0.004
1
8mer
1017-1042
0.004
0
8mer
3403-3418
0.004
0
8mer
2465-2480
0.004
Not Conserved
8mer
3816-3829
0.004
0
6mer
68-86
0.004
0
9mer
2570-2588
0.004
Not Conserved
8mer
4480-4505
0.004
0
8mer
3870-3895
0.003
0
8mer
1215-1240
0.003
0
8mer
1415-1430
0.003
0
9mer
1887-1905
0.003
Not Conserved
7mer
2310-2324
0.003
Not Conserved
8mer
1940-1957
0.003
Not Conserved
8mer
1317-1342
0.003
Not Conserved
8mer
2046-2062
0.003
Not Conserved
8mer
2150-2175
0.002
Not Conserved
8mer
4187-4202
0.002
Not Conserved
6mer
5503-5520
0.002
0
8mer
2784-2808
0.002
0
6mer
1570-1588
0.002
0
8mer
2837-2853
0.002
Not Conserved
8mer
4134-4159
0.002
Not Conserved
6mer
1123-1139
0.001
1
6mer
2204-2216
0.001
Not Conserved
XLOC_013773
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028422
Biotype: transcript isomorph
Gene id: XLOC_013773
Gene Name: XLOC_013773
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
42-57
0.036
1
8mer
148-167
0.027
1
8mer
253-273
0.019
0
8mer
623-648
0.012
0
8mer
783-807
0.012
1
8mer
5480-5495
0.008
Not Conserved
8mer
836-851
0.007
Not Conserved
8mer
1344-1358
0.005
0
8mer
1043-1058
0.004
Not Conserved
6mer
5642-5664
0.004
0
8mer
3234-3260
0.004
0
8mer
1155-1178
0.004
0
8mer
2884-2902
0.003
Not Conserved
8mer
2355-2370
0.003
0
9mer
3126-3145
0.003
Not Conserved
8mer
1962-1977
0.003
Not Conserved
8mer
1452-1467
0.003
Not Conserved
8mer
2071-2086
0.002
Not Conserved
8mer
2624-2649
0.002
0
8mer
2260-2274
0.002
Not Conserved
7mer
5536-5562
0.002
Not Conserved
8mer
1611-1631
0.002
Not Conserved
7mer
1152-1165
0.002
0
8mer+wobble
2726-2742
0.002
Not Conserved
8mer
2512-2534
0.002
Not Conserved
6mer
3341-3360
0.002
0
7mer
3338-3360
0.001
0
7mer
2459-2484
0.001
0
6mer
5539-5562
0.001
Not Conserved
6mer
1665-1679
0.001
Not Conserved
7mer
2621-2639
0.001
Not Conserved
6mer
3766-3781
0.001
Not Conserved
7mer
2462-2488
0.000
Not Conserved
6mer
3668-3687
0.000
Not Conserved
6mer
2574-2597
0.000
Not Conserved
6mer
2465-2488
0.000
Not Conserved
6mer
1614-1640
0.000
Not Conserved
AP000688.29
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000422473
Biotype: lincRNA
Gene id: ENSG00000233393
Gene Name: AP000688.29
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
342-359
0.156
0
6mer
986-1013
0.007
0
LINC00662
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590523
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
513-535
0.125
0
7mer
859-871
0.027
0
6mer
1759-1775
0.009
0
6mer
1574-1597
0.002
Not Conserved
LINC00662
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_027301.1
Biotype: lincRNA
Gene id: NR_027301.1 (gene)
Gene Name: LINC00662
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
511-533
0.124
0
7mer
857-869
0.027
0
6mer
1757-1773
0.009
0
6mer
1572-1595
0.002
Not Conserved
XLOC_013931
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028843
Biotype: transcript isomorph
Gene id: XLOC_013931
Gene Name: XLOC_013931
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
565-582
0.152
0
6mer
1209-1236
0.006
0
CTC-459F4.3
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000585827
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
500-518
0.063
0
8mer
159-177
0.051
0
7mer
159-179
0.025
0
6mer
108-134
0.015
0
CTC-459F4.3
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588636
Biotype: lincRNA
Gene id: ENSG00000267575
Gene Name: CTC-459F4.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
536-554
0.062
0
8mer
195-213
0.050
0
7mer
195-215
0.024
0
6mer
144-170
0.017
0
RP11-507B12.1
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559590
Biotype: lincRNA
Gene id: ENSG00000259675
Gene Name: RP11-507B12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
141-164
0.140
9
RP11-507B12.1
hsa-miR-15a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560686
Biotype: lincRNA
Gene id: ENSG00000259675
Gene Name: RP11-507B12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
167-190
0.137
9
RP11-543D5.2
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000438589
Biotype: lincRNA
Gene id: ENSG00000223814
Gene Name: RP11-543D5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
194-200
0.133
10
RP11-206L10.3
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000416385
Biotype: lincRNA
Gene id: ENSG00000235373
Gene Name: RP11-206L10.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3455-3480
0.081
0
7mer
4512-4524
0.052
0
RP11-34P13.13
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000484859
Biotype: antisense
Gene id: ENSG00000241860
Gene Name: RP11-34P13.13
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3455-3480
0.080
1
7mer
4512-4524
0.053
1
RP11-260G13.1
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000549515
Biotype: lincRNA
Gene id: ENSG00000258107
Gene Name: RP11-260G13.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
95-109
0.133
12
RP11-12M5.3
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000453051
Biotype: antisense
Gene id: ENSG00000229407
Gene Name: RP11-12M5.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3-30
0.113
3
6mer
102-123
0.005
3
6mer
297-316
0.005
2
6mer
162-181
0.003
1
XLOC_013779
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028429
Biotype: transcript isomorph
Gene id: XLOC_013779
Gene Name: XLOC_013779
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3101-3116
0.026
0
8mer
3048-3073
0.023
1
8mer
2886-2906
0.021
1
7mer
230-244
0.010
Not Conserved
8mer
495-513
0.007
Not Conserved
7mer
737-751
0.006
Not Conserved
7mer
654-678
0.006
Not Conserved
8mer
845-860
0.006
Not Conserved
7mer
952-971
0.004
1
8mer
1163-1189
0.004
Not Conserved
8mer
1110-1134
0.004
Not Conserved
6mer
955-971
0.003
1
6mer
2990-3010
0.002
0
6mer
1680-1699
0.001
Not Conserved
RP1-74M1.3
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000610135
Biotype: lincRNA
Gene id: ENSG00000272796
Gene Name: RP1-74M1.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4312-4336
0.036
5
7mer
4098-4118
0.034
8
8mer
3201-3222
0.029
2
6mer
108-131
0.009
7
6mer
25-50
0.004
2
6mer
200-214
0.003
1
7mer
1514-1532
0.003
3
6mer
4429-4450
0.002
1
8mer+wobble
3741-3765
0.001
Not Conserved
6mer
1573-1584
0.001
6
RP11-379B18.5
hsa-miR-15a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000600280
Biotype: lincRNA
Gene id: ENSG00000241288
Gene Name: RP11-379B18.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
215-234
0.122
3
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